The detailed information of tRNA gene sequence


Sequence ID>WENV080813
Genome IDABEF01003802
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 444
End posion on genome 351
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgaaaaaatT
tRNA gene sequence 
GGAAGCGTGGGTGAGTGGCTTAAACCAGAAGTTTGCTAAATTTCCGTAGGATTTATTTTC
TACCAAGAGTTCGAATCTCTTCGCTTCCGCCA
Downstream region at tRNA end position 
Gaaactaatt
Secondary structure (Cloverleaf model)
>WENV080813	Ser	GCT
                   T      GCCA Gaaactaatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T T C T C     A
      T G A        G      | | | | |     G
    G       G T G G       A A G A G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTAGGATTTATTTTCTACC
                    G - C
                    A - T
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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