The detailed information of tRNA gene sequence


Sequence ID>WENV080843
Genome IDABEF01006373
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 290
End posion on genome 214
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccggcgcag
tRNA gene sequence 
GGGGCGGTAGCTCAGTCGGTCAGAGCAGAGGACTCATAATCCTTGGGTCGTGGGTTCGAG
CCCCACCCGCCCCACCG
Downstream region at tRNA end position 
gatggccgtg
Secondary structure (Cloverleaf model)
>WENV080843	Met	CAT
                   g      ACCG gatggccgtg
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          C G
                    T     C A C C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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