The detailed information of tRNA gene sequence


Sequence ID>WENV081015
Genome IDABEF01021666
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 857
End posion on genome 946
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taattttgtc
tRNA gene sequence 
GGAGAGTTGGCCGAGTGGTCGAAGGCGCACGCTTGGAAAGCGCGTAGAGATTCAAACCTC
TCGTGGGTTCGAATCCCACACTCTCCTGAA
Downstream region at tRNA end position 
aaattaagtc
Secondary structure (Cloverleaf model)
>WENV081015	Ser	GGA
                   c      TGAA aaattaagtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGAGATTCAAACCTCTC
                    C - G
                    A   C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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