The detailed information of tRNA gene sequence


Sequence ID>WENV081052
Genome IDABEF01024574
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 943
End posion on genome 854
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcattaaata
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCTGGTTTGCTAAATCAGTATACGGGTAACCGTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
atttttttta
Secondary structure (Cloverleaf model)
>WENV081052	Ser	GCT
                   a      GCCA atttttttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGGTAACCGTATC
                    C - G
                    T - A
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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