The detailed information of tRNA gene sequence


Sequence ID>WENV081068
Genome IDABEF01025497
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 818
End posion on genome 907
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attaacaaca
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCTGAAAGCGGCACCCTGCTAAGGTGTTATACTCGTAAGGGTA
TCGGGGGTTCGAATCCCTTCCTCTCCGCTT
Downstream region at tRNA end position 
taaaagattg
Secondary structure (Cloverleaf model)
>WENV081068	Ser	GCT
                   a      GCTT taaaagattg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + + | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    C       A A G C
      T G A        G     TATACTCGTAAGGGTATC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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