The detailed information of tRNA gene sequence


Sequence ID>WENV081081
Genome IDABEF01026345
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 417
End posion on genome 340
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcgggccccT
tRNA gene sequence 
AGGGGTGTAGCTCAGTCGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTAGGTTCGAGT
CCTATCGCCCCTGCCA
Downstream region at tRNA end position 
Gcccgcgcgg
Secondary structure (Cloverleaf model)
>WENV081081	Trp	CCA
                   T      GCCA Gcccgcgcgg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     T A T C C     A
      T G A        A      + | | | |     G
    C       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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