The detailed information of tRNA gene sequence


Sequence ID>WENV081145
Genome IDABEF01030583
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 611
End posion on genome 521
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attactagaa
tRNA gene sequence 
GGAGAGGTGGCAGAGCTTGGCTGAATGCGCTGCACTCGAAATGCAGTATGGTCCTAGATC
ATCGGGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aaaactatga
Secondary structure (Cloverleaf model)
>WENV081145	Ser	CGA
                   a      GCCA aaaactatga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | + | | |     A
  T         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    C T G A        G     TATGGTCCTAGATCATC
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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