The detailed information of tRNA gene sequence


Sequence ID>WENV081169
Genome IDABEF01032771
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 912
End posion on genome 834
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaggcagggT
tRNA gene sequence 
AGGAGCGTAGCTCAGCCTGGTAGAGCAACGGTCTCCAAAACCGTGGGTCGCGGGTTCAAA
TCCTGCCGCTCCTGCCA
Downstream region at tRNA end position 
Ccctccaccg
Secondary structure (Cloverleaf model)
>WENV081169	Trp	CCA
                   T      GCCA Ccctccaccg
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | + | |     A
    C       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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