The detailed information of tRNA gene sequence


Sequence ID>WENV081210
Genome IDABEF01035827
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 449
End posion on genome 527
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaactccgaT
tRNA gene sequence 
GGGCCTGCAGCTCAGTTGGTTAGAGCAGTGGACTCATAAGCCATTGGTCGAAGGTTCGAG
TCCTTCTGGGCCCGTGG
Downstream region at tRNA end position 
Ttgagctgcc
Secondary structure (Cloverleaf model)
>WENV081210	Met	CAT
                   T      GTGG Ttgagctgcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G + T          T G
                    C     C T T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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