The detailed information of tRNA gene sequence


Sequence ID>WENV081225
Genome IDABEF01037312
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 865
End posion on genome 775
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cctccgcttT
tRNA gene sequence 
GGAGAGTTGGCAGAGCGGTAATGCAGCGGATTGCTAATCCGTCAAGGTATAACAATCTTG
CGAGAGTTCAAATCTCTCACTCTCCGCAC
Downstream region at tRNA end position 
Tttcataacg
Secondary structure (Cloverleaf model)
>WENV081225	Ser	GCT
                   T      GCAC Tttcataacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C T C     A
        G A        G      | | | | |     A
      C     G A C G       G A G A G     C
      G       | | |                 T T
      G     A T G C
        T A        A     CAAGGTATAACAATCTTGC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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