The detailed information of tRNA gene sequence


Sequence ID>WENV081307
Genome IDABEF01042156
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 1226
End posion on genome 1302
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
taggccctat
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGATAGAGCGTGTGGCTACGAACCACAAGGTCGGGAGTTCGAA
TCTCTTCGGGCGCCCGTnnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV081307	Arg	ACG
                   t      nnnn nnnnnnnnnn
                     G + T
                     C - G
                     G - C
                     C   C
                     C   C
                     C - G
                     G - C          T C
                    T     G G G C T     T
      T G A        A        + +   +     C
    T       C T C G       G T T C G     T
    G       | | | |                 A A
    G       G A G C
      A T A        G     AGGTCGGGA
                    T - A
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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