The detailed information of tRNA gene sequence


Sequence ID>WENV081380
Genome IDABEF01044911
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 1313
End posion on genome 1236
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccggcgttgT
tRNA gene sequence 
AGGCCAGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
Tttacagcaa
Secondary structure (Cloverleaf model)
>WENV081380	Trp	CCA
                   T      GCCA Tttacagcaa
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T T G       G G G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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