The detailed information of tRNA gene sequence


Sequence ID>WENV081429
Genome IDABEF01046933
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 621
End posion on genome 532
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cacttgattT
tRNA gene sequence 
GGAGAAATGGCAGAGTGGTCGAATGCGGCAGTCTTGAAAACTGTTGAGGGTCATACCTCC
GGGGGTTCGAATCCCTCTTTCTCCGCGC
Downstream region at tRNA end position 
Tcaaattcct
Secondary structure (Cloverleaf model)
>WENV081429	Ser	TGA
                   T      GCGC Tcaaattcct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGAGGGTCATACCTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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