The detailed information of tRNA gene sequence


Sequence ID>WENV081498
Genome IDABEF01049145
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 1305
End posion on genome 1214
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccgggcccC
tRNA gene sequence 
GGAGGGATGCGAGAGCGGACGATTCGGCACGCCTGGAACGCGTGTGTGGCTTCACCGTCA
CCGTGGGTTCGAATCCCACTCCCTCCGCCG
Downstream region at tRNA end position 
Ttcagcggct
Secondary structure (Cloverleaf model)
>WENV081498	Ser	GGA
                   C      GCCG Ttcagcggct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G       + | | |                 T T
    A       T T C G
      C G A        G     TGTGGCTTCACCGTCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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