The detailed information of tRNA gene sequence


Sequence ID>WENV081525
Genome IDABEF01050069
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 1821
End posion on genome 1729
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgttcggtT
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGCGCTAGTTTGCTAAACTGGTTTACCTATAACGGGT
AACGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
Ttcttccaac
Secondary structure (Cloverleaf model)
>WENV081525	Ser	GCT
                   T      GCCA Ttcttccaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G C G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TTTACCTATAACGGGTAAC
                    C - G
                    T + G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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