The detailed information of tRNA gene sequence


Sequence ID>WENV081568
Genome IDABEF01051138
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 765
End posion on genome 856
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acccaggatg
tRNA gene sequence 
GGAGGGATCGCATAGTGGTCTAGTGCGGGCGCCTGCTAAGCGCTTATCCTGAGAAATTGG
GATCGTGGGTTCGAATCCCACTCCCTCCGCCG
Downstream region at tRNA end position 
ttcatatatc
Secondary structure (Cloverleaf model)
>WENV081568	Ser	GCT
                   g      GCCG ttcatatatc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TATCCTGAGAAATTGGGATC
                    G + T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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