The detailed information of tRNA gene sequence


Sequence ID>WENV081627
Genome IDABEF01052764
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 1375
End posion on genome 1299
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttattgatgc
tRNA gene sequence 
GGTGAGGTAGTACAGTCCGGTAGTGCGTGGGCCTGCAAAGCCCGAAGTCGAGAGTTCAAA
TCTCTCCCTCACCTCTT
Downstream region at tRNA end position 
tgatcttggt
Secondary structure (Cloverleaf model)
>WENV081627	Cys	GCA
                   c      TCTT tgatcttggt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | | | | |     A
    C       C A T G       G A G A G     C
    C       | | + |                 T T
    G       G T G C
      G T A        G     AAGTC
                    T + G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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