The detailed information of tRNA gene sequence


Sequence ID>WENV081635
Genome IDABEF01052863
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 1176
End posion on genome 1101
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
tccttatatT
tRNA gene sequence 
TGGGGAGTCGTCTAATGGTAGGACAGCGGATTCTGGTTCCGTAAGTGAGGGTTCAACTCC
TTCCTCCCCAGCAT
Downstream region at tRNA end position 
Tggcgcgttc
Secondary structure (Cloverleaf model)
>WENV081635	Gln	CTG
                   T      GCAT Tggcgcgttc
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T C
                    T     C T T C C     A
        A A        C      | | + | |     A
      T     T C T G       G A G G G     C
      G     + | | |                 T T
      G     G G A C
        T A        A     AAGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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