The detailed information of tRNA gene sequence


Sequence ID>WENV081712
Genome IDABEF01054152
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 551
End posion on genome 460
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgaaaaaatT
tRNA gene sequence 
GGAAGCGTGGGTGAGAGGCTTAAACCAGAAGTTTGCTAAATTTCCGTTGGCGTAAGCCAA
CCGTTGGTTCGAATCCAACCGCTTCCGCCA
Downstream region at tRNA end position 
Ttcttagtaa
Secondary structure (Cloverleaf model)
>WENV081712	Ser	GCT
                   T      GCCA Ttcttagtaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A A C C     A
      A G A        G      | | | | |     G
    G       G T G G       G T T G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTTGGCGTAAGCCAACC
                    G - C
                    A - T
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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