The detailed information of tRNA gene sequence


Sequence ID>WENV081736
Genome IDABEF01054502
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 4358
End posion on genome 4270
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
actgattttT
tRNA gene sequence 
GCAGAGGTCGCTTAGCCTGGTAGAGCGCGGGCCTTGAGAGCCTGTGTGTGCAAGCACGCG
GGGGTTCGAATCCCTCTCTCTGCGCTT
Downstream region at tRNA end position 
Gttatttccc
Secondary structure (Cloverleaf model)
>WENV081736	Ser	TGA
                   T      GCTT Gttatttccc
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     G
    C       T T C G       G G G G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     TGTGTGCAAGCACGC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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