The detailed information of tRNA gene sequence


Sequence ID>W1720001156
Genome IDFQUI01000009
Search identical group
Phylum/ClassThermotogota
SpeciesMarinitoga hydrogenitolerans DSM 16785 [FQUI]
Start position on genome 26103
End posion on genome 26014
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aattacaaac
tRNA gene sequence 
GGAGGCGTGTTCCGAATTGGCTAAGGAGCCGGTCTCGAAAACCGGTGAGAGGAAACTCTC
GTGTGGGTTCGAGCCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
tttttatata
Secondary structure (Cloverleaf model)
>W1720001156	Ser	CGA
                   c      GCCA tttttatata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          C G
                    T     C A C C C     A
    T A A G        G      | | | | |     G
  T         C C T T       G T G G G     C
  G           | + |                 T T
  G         A G G A
    C T A          G     TGAGAGGAAACTCTCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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