The detailed information of tRNA gene sequence


Sequence ID>W1720001237
Genome IDFXBB01000001
Search identical group
Phylum/ClassSynergistota
SpeciesDethiosulfovibrio salsuginis [FXBB]
Start position on genome 41871
End posion on genome 41969
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgtttcttgc
tRNA gene sequence 
GGAAGCGAATGTGTCCTGGTGGGCGCCCCGGGCTTCAAACCCGCGAGGGGGGCGGTATAG
GCCGTCTCCGGTGAGTTCGATTCTCACACGCTTCCGCCA
Downstream region at tRNA end position 
aatagccttt
Secondary structure (Cloverleaf model)
>W1720001237	SeC	TCA
                   c      GCCA aatagccttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     A   A          T T
                    A     C A C T C     A
      T C C        T      | | | | |     G
    G       T G T G       G T G A G     C
    G       + | + |                 T T
    T       G C G C
      G G          C     GAGGGGGGCGGTATAGGCCGTCTCCG
                    C   C
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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