The detailed information of tRNA gene sequence


Sequence ID>W1720001325
Genome IDJWSX01001753
Search identical group
Phylum/ClassChloroflexota
SpeciesLitorilinea aerophila [JWSX]
Start position on genome 1999
End posion on genome 1903
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatggtgggc
tRNA gene sequence 
GGGAAGGCATGTGTCCCGGTGGATGCCCTGGTCTTCAAAATCAGTGGCAGGCGGCGCAGA
GCCGGCTGCGGTGGGTTCGACTCCCACGCCTTCCCGCtt
Downstream region at tRNA end position 
tgaatttatg
Secondary structure (Cloverleaf model)
>W1720001325	SeC	TCA
                   c      GCtt tgaatttatg
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G          T C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    G       T G T G       G T G G G     C
    G       | + + |                 T T
    T       A T G C
      G G          C     TGGCAGGCGGCGCAGAGCCGGCTGCG
                    C - G
                    T - A
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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