The detailed information of tRNA gene sequence


Sequence ID>W1720001733
Genome IDLNDY01000051
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctomycetaceae bacterium Ga0077529 [LNDY]
Start position on genome 24418
End posion on genome 24509
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agcctccttc
tRNA gene sequence 
GGAAGGTAGCCGGATACGGTTCGCCGGGGCGGTTTGCTAAACCGCTCACGCTTCGCACGA
GGTCCTGGGAGTTCAAATCTCCTGCCTTTCGCtc
Downstream region at tRNA end position 
acgtagatca
Secondary structure (Cloverleaf model)
>W1720001733	Ser	GCT
                   c      GCtc acgtagatca
                     G - C
                     G + T
                     A - T
                     A - T
                     G - C
                     G - C
                     T + G          T A
                    A     T C C T C     A
    C A T A        G      + | | | |     A
  G         G G C C       G G G A G     C
  G         | | | |                 T T
  T         C C G G
    T C G          G     TCACGCTTCGCACGAGGTCCT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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