The detailed information of tRNA gene sequence


Sequence ID>W1720002123
Genome IDLSSX01000057
Search identical group
Phylum/ClassUnclassified
Speciesbacterium SCGC AG-212-C10 [LSSX]
Start position on genome 13791
End posion on genome 13694
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttgtcgcggc
tRNA gene sequence 
GGGAGTGGATGGGGCCCGGTGGCCTCTGCCGTCTTCAAAACGGTCGTCCTGTCGCAAGCG
CGGCGGGAGGTGGGTTCGACTCCCATGCACTCCCGCCA
Downstream region at tRNA end position 
ggggcctgaa
Secondary structure (Cloverleaf model)
>W1720002123	SeC	TCA
                   c      GCCA ggggcctgaa
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T C
                    A     T A C C C     A
      C C C        T      + | | | |     G
    G       G G G G       G T G G G     C
    G       | | + |                 T T
    T       C C T C
      G G          T     CGTCCTGTCGCAAGCGCGGCGGGAG
                    G + T
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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