The detailed information of tRNA gene sequence


Sequence ID>W1720002164
Genome IDLUZU01000171
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilineales bacterium Chloro_01 [LUZU]
Start position on genome 8832
End posion on genome 8929
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgctgccggt
tRNA gene sequence 
GGGGGTGGATGAGTCCCGGTGGGCTCCGCGGTCTTCAAAATCGTTGTGGGGTGCTGCAGA
AGCGGCCCTGGTGGGTTCGACTCCCATCCACTCCCGCCt
Downstream region at tRNA end position 
attttgtagc
Secondary structure (Cloverleaf model)
>W1720002164	SeC	TCA
                   t      GCCt attttgtagc
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     G - C          T C
                    A     T A C C C     A
      C C C        T      + | | | |     G
    G       T G A G       G T G G G     C
    G       + | | |                 T T
    T       G C T C
      G G          C     TGTGGGGTGCTGCAGAAGCGGCCCTG
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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