The detailed information of tRNA gene sequence


Sequence ID>W1720002675
Genome IDMCIE01000002
Search identical group
Phylum/ClassFirmicutes
SpeciesStaphylococcus aureus subsp. aureus (MCIE) subsp. aureus [MCIE]
Start position on genome 503790
End posion on genome 503881
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attgtgttta
tRNA gene sequence 
GGAGGAATACCCAAGTCCGGCTGAAGGGATCGGTCTTGAAAACCGACAGGGGCTTAACGG
CTCGCGGGGTTCGAATCCCTCTTCCTCCGCCA
Downstream region at tRNA end position 
tcaatattta
Secondary structure (Cloverleaf model)
>W1720002675	Ser	TGA
                   a      GCCA tcaatattta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
    C T G A        A        + | | |     G
  C         A C C C       C G G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGGGCTTAACGGCTCG
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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