The detailed information of tRNA gene sequence


Sequence ID>W1720002678
Genome IDMCNV01000012
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesParaburkholderia nodosa [MCNV]
Start position on genome 88225
End posion on genome 88320
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtttcacgaa
tRNA gene sequence 
GGAAGGCATTCGTATCCGGTGGTACGGCCGGGCTTCAAACCCGGTTGGGGGCGTCAGCCG
CTCCCGGGTCAGTTCGACTCTGGCTGCCTTCCGCCA
Downstream region at tRNA end position 
tatgggcctt
Secondary structure (Cloverleaf model)
>W1720002678	SeC	TCA
                   a      GCCA tatgggcctt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G G T C     A
      C C T        T      | + | | |     G
    G       A T G C       G T C A G     C
    G       | | | |                 T T
    T       T A C G
      G G          G     TTGGGGGCGTCAGCCGCTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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