The detailed information of tRNA gene sequence


Sequence ID>W1720002854
Genome IDMGNL01000140
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium RBG_16_51_16 [MGNL]
Start position on genome 15040
End posion on genome 14945
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccttgcgggc
tRNA gene sequence 
GGGAGTGGTAAAGTCCCGGTGGGCTTCCTGGTCTTCAAAACCTGTGGCGGGCCGCCCTGC
GGGCCGCGGTGGGTTCGACACCCATCCACTCCCGCCt
Downstream region at tRNA end position 
gtcgttctat
Secondary structure (Cloverleaf model)
>W1720002854	SeC	TCA
                   c      GCCt gtcgttctat
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          A C
                    T     T A C C C     A
      C C C        A      + | | | |     G
    G       T G A A       G T G G G     C
    G       + | | |                 T T
    T       G C T T
      G G          C     TGGCGGGCCGCCCTGCGGGCCGCG
                    C - G
                    T   T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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