The detailed information of tRNA gene sequence


Sequence ID>W1720002855
Genome IDMGOE01000050
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium RBG_16_72_14 [MGOE]
Start position on genome 7818
End posion on genome 7720
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
accatcgctc
tRNA gene sequence 
GTGGGAGCGGAGGGGTCCCGGTGGGTCCCCCGGTCTTCAACACCGGTGGCGCGGCGCCCG
GCGTCGCGCGGTGGGTTCGACTCCCATGCGCTCCCGCCA
Downstream region at tRNA end position 
caacacccgg
Secondary structure (Cloverleaf model)
>W1720002855	SeC	TCA
                   c      GCCA caacacccgg
                     G - C
                     T   C
                     G - C
                     G + T
                     G - C
                     A   G
                     G - C
                     C - G          T C
                    G     T A C C C     A
    C C T G        G      + | | | |     G
  C         G G G A       G T G G G     C
  G           + |                   T T
  G         G T C C
    T G G          C     TGGCGCGGCGCCCGGCGTCGCGCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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