The detailed information of tRNA gene sequence


Sequence ID>W1720002859
Genome IDMGPS01000030
Search identical group
Phylum/ClassUnclassified
SpeciesDeltaproteobacteria bacterium GWC2_42_11 [MGPS]
Start position on genome 5109
End posion on genome 5203
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aaaatatcat
tRNA gene sequence 
GGAGGGTGATAGCGCCCGGTGGTGCTGCCAGTCTTCAAAACTGTGCTGTCCTGTAAAGCA
GGACAGGTAGGTTCGACTCCTGCCACCTTCCGCCA
Downstream region at tRNA end position 
atcttaaatt
Secondary structure (Cloverleaf model)
>W1720002859	SeC	TCA
                   t      GCCA atcttaaatt
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          T C
                    A     C G T C C     A
      C C C        T      | + | | |     G
    G       G C G A       G T A G G     C
    G       + | | |                 T T
    T       T G C T
      G G          G     GCTGTCCTGTAAAGCAGGACAG
                    C   T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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