The detailed information of tRNA gene sequence


Sequence ID>W1720002867
Genome IDMGZD01000111
Search identical group
Phylum/ClassGemmatimonadota
SpeciesGemmatimonadetes bacterium GWC2_71_9 [MGZD]
Start position on genome 223
End posion on genome 319
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgtgacgcgc
tRNA gene sequence 
GGGGGCGGATCGGGCCTGGTGGTCTGAGCAGTCTTCAAAACTGTATGGGGCCCGCTCTGC
GGGCCCTGGTGGGTTCGATTCCCACACGCTCCCGCCA
Downstream region at tRNA end position 
gcacggacag
Secondary structure (Cloverleaf model)
>W1720002867	SeC	TCA
                   c      GCCA gcacggacag
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C C        T      | | | | |     G
    G       G G G C       G T G G G     C
    G       + | + |                 T T
    T       T C T G
      G G          A     ATGGGGCCCGCTCTGCGGGCCCTG
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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