The detailed information of tRNA gene sequence


Sequence ID>W1720002869
Genome IDMHBJ01000103
Search identical group
Phylum/ClassLentisphaerota
SpeciesLentisphaerae bacterium GWF2_52_8 [MHBJ]
Start position on genome 2152
End posion on genome 2246
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agtttgatgc
tRNA gene sequence 
GGAGGCGTTTGGTGGCTGGCGCTGCCCGCAGTCTTCAAAACTGTCTGCCGGGCCGCAAGG
TCCGGGGTGGGTTCGATTCCCATGCGCCTCCGCCA
Downstream region at tRNA end position 
agactgaaag
Secondary structure (Cloverleaf model)
>W1720002869	SeC	TCA
                   c      GCCA agactgaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T + G          T T
                    T     T A C C C     A
      T C G        T      + | | | |     G
    G       G T G G       G T G G G     C
    G       + + | |                 T T
    C       T G C C
      G C          C     CTGCCGGGCCGCAAGGTCCGGG
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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