The detailed information of tRNA gene sequence


Sequence ID>W1720002948
Genome IDMKTJ01000077
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium 54-19 [MKTJ]
Start position on genome 563660
End posion on genome 563756
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttattcaagt
tRNA gene sequence 
GGGAGTGTATGTAGTCCGGTGGCTGCCACAGTCTTCAAAACTGTTGTATACCGTTAGGAA
CGGTGTAGGTGGGTTCGACTCCCATCCGCTCTCGCCA
Downstream region at tRNA end position 
aactttttta
Secondary structure (Cloverleaf model)
>W1720002948	SeC	TCA
                   t      GCCA aactttttta
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     T   C          T C
                    A     T A C C C     A
      C C T        T      + | | | |     G
    G       G A T G       G T G G G     C
    G       | | + |                 T T
    T       C T G C
      G G          C     TGTATACCGTTAGGAACGGTGTAG
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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