The detailed information of tRNA gene sequence


Sequence ID>W1720002953
Genome IDMKUW01000007
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium 44-23 [MKUW]
Start position on genome 347625
End posion on genome 347530
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgcttaatgt
tRNA gene sequence 
GGGAGTGATTAGGTCCCGGTGGGCCTCTCGGTCTTCAAAATCGGTGGCGGGTTGTTATGC
AAGCCGCGGTGGGTTCGACTCCCATTCACTCCCGCCt
Downstream region at tRNA end position 
gttagctatt
Secondary structure (Cloverleaf model)
>W1720002953	SeC	TCA
                   t      GCCt gttagctatt
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     A - T          T C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G G A       G T G G G     C
    G       + | | |                 T T
    T       G C C T
      G G          C     TGGCGGGTTGTTATGCAAGCCGCG
                    T + G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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