The detailed information of tRNA gene sequence


Sequence ID>W1720003002
Genome IDMNEM01000178
Search identical group
Phylum/ClassGemmatimonadota
SpeciesGemmatimonadetes bacterium 13_1_40CM_66_11 [MNEM]
Start position on genome 3822
End posion on genome 3729
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cggcactcgt
tRNA gene sequence 
GGGAGCGGATTGGGTCTGGTGGCCTGACCAGTCTTCAAAACTGGCTTGACCCCGAAAGGG
GTTAGATGGGTTCGATTCCCATACGCTCCCGCCA
Downstream region at tRNA end position 
ccgcgcctgg
Secondary structure (Cloverleaf model)
>W1720003002	SeC	TCA
                   t      GCCA ccgcgcctgg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G   A          T T
                    A     T A C C C     A
      T C T        T      | | | | |     G
    G       G G G T       A T G G G     C
    G       | | + +                 T T
    T       C C T G
      G G          A     CTTGACCCCGAAAGGGGTTAG
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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