The detailed information of tRNA gene sequence


Sequence ID>W1720003003
Genome IDMNEU01000086
Search identical group
Phylum/ClassArmatimonadota
SpeciesArmatimonadetes bacterium 13_1_40CM_64_14 [MNEU]
Start position on genome 56572
End posion on genome 56479
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tccgtaggat
tRNA gene sequence 
GGAGGGCAGTGGGGGCTGGTGCCCCTTCCGGTCTTCAAAACCGGCGGGAGACCAGTCGGT
CTCCGGTGCGTTCGATTCGCACGGCCCTCCGCCA
Downstream region at tRNA end position 
aaactcacta
Secondary structure (Cloverleaf model)
>W1720003003	SeC	TCA
                   t      GCCA aaactcacta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A   G          T T
                    G     C A C G C     A
      T C G        T      | | | | |     G
    G       G G G G       G T G C G     C
    G       | | | +                 T T
    T       C C C T
      G C          T     CGGGAGACCAGTCGGTCTCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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