The detailed information of tRNA gene sequence


Sequence ID>W1720003005
Genome IDMNEX01000129
Search identical group
Phylum/ClassAcidobacteriota
SpeciesAcidobacteria bacterium 13_1_40CM_65_14 [MNEX]
Start position on genome 10742
End posion on genome 10838
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatctcatgt
tRNA gene sequence 
GGAAGCGAACGGGGCCCGGTGGCCCTCCCGGTCTTCAAAATCGGTTGCTCCCCGTTTATT
CGGGGAGGCTCGGTTCGACTCCGAGGCGCTTCCGCCA
Downstream region at tRNA end position 
accttcgctc
Secondary structure (Cloverleaf model)
>W1720003005	SeC	TCA
                   t      GCCA accttcgctc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     A   G          T C
                    A     G A G C C     A
      C C C        C      | | | | |     G
    G       G G G G       C T C G G     C
    G       | | | +                 T T
    T       C C C T
      G G          C     TTGCTCCCCGTTTATTCGGGGAGG
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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