The detailed information of tRNA gene sequence


Sequence ID>W1720003012
Genome IDMNHV01000134
Search identical group
Phylum/ClassAcidobacteriota
SpeciesAcidobacteria bacterium 13_1_40CM_2_60_7 [MNHV]
Start position on genome 6420
End posion on genome 6518
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
taattcctcc
tRNA gene sequence 
GGAGGCGAAAGGGGTCCGGTGACCTTCCCGGTCTTCAAAGCCGGCGATTCGACCCTTCGC
GGGCCGAATGGTGGGTTCGACTCCCACACGCTTCCGCCA
Downstream region at tRNA end position 
acttatttgt
Secondary structure (Cloverleaf model)
>W1720003012	SeC	TCA
                   c      GCCA acttatttgt
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     C - G
                     G - C
                     A   A          T C
                    A     C A C C C     A
      C C T        A      | | | | |     G
    G       G G G G       G T G G G     C
    G       | | + +                 T T
    T       C C T T
      G A          C     CGATTCGACCCTTCGCGGGCCGAATG
                    C - G
                    C - G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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