The detailed information of tRNA gene sequence


Sequence ID>W1720003015
Genome IDMNIF01000085
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium 13_1_20CM_54_36 [MNIF]
Start position on genome 7914
End posion on genome 7816
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgcgaaacat
tRNA gene sequence 
GGAGGTGTAGGGGCCCCGGTGGGTCTCACCGTCTTCAAAACGGCTGAGGGGTCGCTCGGC
GCGGTCCCTGGTGGGTTCGACTCCCATACGCCTCTGCCA
Downstream region at tRNA end position 
atattatttg
Secondary structure (Cloverleaf model)
>W1720003015	SeC	TCA
                   t      GCCA atattatttg
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C
                     T - A          T C
                    A     T A C C C     A
      C C C        G      + | | | |     G
    G       C G G G       G T G G G     C
    G       | + | +                 T T
    T       G T C T
      G G          C     TGAGGGGTCGCTCGGCGCGGTCCCTG
                    A   C
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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