The detailed information of tRNA gene sequence


Sequence ID>W1720003019
Genome IDMNJR01000093
Search identical group
Phylum/ClassAcidobacteriota
SpeciesAcidobacteria bacterium 13_1_20CM_3_53_8 [MNJR]
Start position on genome 58948
End posion on genome 58850
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccgaaacagc
tRNA gene sequence 
GGAGGCGCATCCGTTCTGGTGAGCGGCGCGGTCTTCAAAATCGTCTGTGAGCCTGTGAGA
GCAGGCTCAGGTAGGTTCGATTCCTACACGCCTCCGCCA
Downstream region at tRNA end position 
agacgatttt
Secondary structure (Cloverleaf model)
>W1720003019	SeC	TCA
                   c      GCCA agacgatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C   A          T T
                    A     C A T C C     A
      T C T        T      | | | | |     G
    G       T G C C       G T A G G     C
    G       + | | |                 T T
    T       G C G G
      G A          C     CTGTGAGCCTGTGAGAGCAGGCTCAG
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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