The detailed information of tRNA gene sequence


Sequence ID>W1720003034
Genome IDMNXJ01000039
Search identical group
Phylum/ClassChloroflexota
SpeciesAnaerolineae bacterium CG2_30_57_67 [MNXJ]
Start position on genome 7719
End posion on genome 7626
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccttacaggc
tRNA gene sequence 
GGGAGTGGTTGGGTCCCGGTGGGCCCTCCGGTCTTCAACACCGGCATTGGGGCGCGTTGC
GTTCCAGGGTGGGTTCGACCCCCATGCACTCCCGttt
Downstream region at tRNA end position 
tttttccatt
Secondary structure (Cloverleaf model)
>W1720003034	SeC	TCA
                   c      Gttt tttttccatt
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          C C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G G G       G T G G G     C
    G       + | | |                 T T
    T       G C C C
      G G          T     CATTGGGGCGCGTTGCGTTCCAGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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