The detailed information of tRNA gene sequence


Sequence ID>W1720003741
Genome IDNDGV01000005
Search identical group
Phylum/ClassCyanobacteriota
Speciescyanobacterium TDX16 [NDGV]
Start position on genome 562653
End posion on genome 562559
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcatgtctcc
tRNA gene sequence 
GGGAGCGTCAGGGTTCCTGGTGGGCTCCGCGGTCTTCAAAGCCGTTGAGACGGCGCCTTG
CGTCGTCTGGTGGGTTCGATTCCCATCCGCTCCCGttc
Downstream region at tRNA end position 
ttttcgatcg
Secondary structure (Cloverleaf model)
>W1720003741	SeC	TCA
                   c      Gttc ttttcgatcg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    C     T A C C C     A
      C C T        A      + | | | |     G
    T       T G G G       G T G G G     C
    G       + | + |                 T T
    G       G C T C
      T G G        C     TGAGACGGCGCCTTGCGTCGTCTG
                    G + T
                    C - G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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