The detailed information of tRNA gene sequence


Sequence ID>W1750005267
Genome IDCDLE01000001
Search identical group
Phylum/ClassArmatimonadota
SpeciesChthonomonas calidirosea [CDLE]
Start position on genome 395812
End posion on genome 395713
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tatttttatt
tRNA gene sequence 
GGGGGCGGATGGGGTCTGGTGGCCCTCCCGGTCTTCAAAATCGTGCGAGAGGCGAGCCGA
TCTCGTCTCTGGTGGGTTCGATTCCCACACGCTCCCGCCA
Downstream region at tRNA end position 
tctgtacctc
Secondary structure (Cloverleaf model)
>W1750005267	SeC	TCA
                   t      GCCA tctgtacctc
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C T        T      | | | | |     G
    G       G G G G       G T G G G     C
    G       | | | +                 T T
    T       C C C T
      G G          C     GCGAGAGGCGAGCCGATCTCGTCTCTG
                    C   T
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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