The detailed information of tRNA gene sequence


Sequence ID>W1730014058
Genome IDLJCR01000023
Search identical group
Phylum/ClassChloroflexota
SpeciesKouleothrix aurantiaca [LJCR]
Start position on genome 7578
End posion on genome 7491
Amino Acid Pseudo
Anticodon CAA
Upstream region at tRNA start position 
cgcaccacat
tRNA gene sequence 
GCCTCCGTGATGGAACAGCAGACATGCCGGTCTCAAACACCGGTGGGCCGCGAGGCTCGT
GCGAGTGCGAATCTCGCCGGAGGTACCA
Downstream region at tRNA end position 
aaaccacgcc
Secondary structure (Cloverleaf model)
>W1730014058	Pseudo	CAA
                   t      ACCA aaaccacgcc
                     G + T
                     C - G
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     C G C T C     A
      C A A        G      | | | | |     G
    A       G G T A       G C G A G     C
    G         | | |                 T G
    C       A C A T
      A G          G     TGGGCCGCGAGGCTCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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