The detailed information of tRNA gene sequence


Sequence ID>W1730014470
Genome IDLJUX01000066
Search identical group
Phylum/ClassUnclassified
Speciescandidate division Zixibacteria bacterium SM23_73_3 [LJUX]
Start position on genome 109
End posion on genome 13
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttttatttca
tRNA gene sequence 
CGGAAGTGGATAGGATCTGGTGGTCCTTGCGGACTTCAAATCCGTGGTCCCTCCGGTTGG
TCCGGGGGGAGGTGGGTTCGATTCCCACCCCTTCCGCtta
Downstream region at tRNA end position 
ttttagtttn
Secondary structure (Cloverleaf model)
>W1730014470	SeC(p)	TCA
                   a      Ctta ttttagtttn
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T   C
                     G - C          T T
                    G     C A C C C     A
      C T A        A      | | | | |     G
    T       G G A T       G T G G G     C
    G       + |                     T T
    G       T C C T
      T G G        T     GGTCCCTCCGGTTGGTCCGGGGGGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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