The detailed information of tRNA gene sequence


Sequence ID>W1730023176
Genome IDLWRZ01000029
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus thiooxidans [LWRZ]
Start position on genome 21161
End posion on genome 21236
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctccatttt
tRNA gene sequence 
GGAACTGTAGCTCAGAGTGTAGAGCGTCTGGCTCATAACCAGGTGGTCGAAGGTTCGAGT
CCTTCCGGTTCCACCA
Downstream region at tRNA end position 
taatttaggt
Secondary structure (Cloverleaf model)
>W1730023176	Met	CAT
                   t      ACCA taatttaggt
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     T + G
                     G - C          T G
                    T     C T T C C     A
      A G A        A      | | | | |     G
    G       C T C G       G A A G G     C
    T       | | | |                 T T
    G       G A G C
      T A          G     TGGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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