The detailed information of tRNA gene sequence


Sequence ID>W1730023808
Genome IDLYDR01000110
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctopirus hydrillae JC280 [LYDR]
Start position on genome 173631
End posion on genome 173545
Amino Acid Pseudo
Anticodon GCT
Upstream region at tRNA start position 
aacctgatct
tRNA gene sequence 
GGAAGGTAGCCGGATATGGTTGGCCGGGCCTGTTTGCTAAACAGTGCAGCATTCGTGCTA
TATGGGTTCGAATCCCTTTCCTTCCGCtc
Downstream region at tRNA end position 
gaaaaactcc
Secondary structure (Cloverleaf model)
>W1730023808	Pseudo	GCT
                   t      GCtc gaaaaactcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T   T          T A
                    A     T T C C C     A
    T A T A        G      |   | | |     G
  G         G G C C       A T G G G     C
  G         | | | |                 T T
  T         C C G G
    T G G          G     GCAGCATTCGTGCTAT
                    C   T
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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