The detailed information of tRNA gene sequence


Sequence ID>W1730026988
Genome IDMETG01000091
Search identical group
Phylum/ClassUnclassified
Speciescandidate division NC10 bacterium RBG_16_65_8 [METG]
Start position on genome 5728
End posion on genome 5822
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gtcatgtatc
tRNA gene sequence 
GGAGGCGGATTGGGCCTGGGGGCCCTCCTGGTCTTCAAAACCGAAGTGGCGCCTAACCCG
TGCTAGGTGGGTTCGATTCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
tcataagggc
Secondary structure (Cloverleaf model)
>W1730026988	SeC(p)	TCA
                   c      GCCA tcataagggc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C C        T      | | | | |     G
    G       G G G T       G T G G G     C
    G       | | |                   T T
    G       C C C T
      G G          C     AGTGGCGCCTAACCCGTGCTAG
                    C   A
                    T + G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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