The detailed information of tRNA gene sequence


Sequence ID>W1730028259
Genome IDMGZE01000068
Search identical group
Phylum/ClassGemmatimonadota
SpeciesGemmatimonadetes bacterium RBG_16_66_8 [MGZE]
Start position on genome 2628
End posion on genome 2724
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gtaactccag
tRNA gene sequence 
GGGGGTGGATTGGGCCTGGTGGCCTGCTCGGTCTTCAAAACCGCAGGGAGGCGCCAGCGG
CGACTCCGGTGGGTTCGATTCCCACACGCTCCCGCCA
Downstream region at tRNA end position 
cgcccccggg
Secondary structure (Cloverleaf model)
>W1730028259	SeC(p)	TCA
                   g      GCCA cgcccccggg
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C C        T      | | | | |     G
    G       G G G T       G T G G G     C
    G       | | + +                 T T
    T       C C T G
      G G          C     AGGGAGGCGCCAGCGGCGACTCCG
                    T   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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